Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AC012645.4-201ENST00000610691 1061 ntBASIC20.08■□□□□ 0.81
APAF1O14727 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.08■□□□□ 0.81
APAF1O14727 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.08■□□□□ 0.8
APAF1O14727 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APAF1O14727 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APAF1O14727 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.08■□□□□ 0.8
APAF1O14727 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
APAF1O14727 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APAF1O14727 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
APAF1O14727 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
APAF1O14727 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
APAF1O14727 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APAF1O14727 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 CICP23-201ENST00000605013 2741 ntBASIC20.07■□□□□ 0.8
APAF1O14727 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
APAF1O14727 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 SF1-209ENST00000433274 2317 ntTSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
APAF1O14727 ACTBP8-201ENST00000403258 1108 ntBASIC20.07■□□□□ 0.8
APAF1O14727 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 AC007389.4-201ENST00000454674 793 ntBASIC20.07■□□□□ 0.8
APAF1O14727 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 AP001889.1-201ENST00000525414 633 ntBASIC20.07■□□□□ 0.8
APAF1O14727 AC068587.3-201ENST00000526613 355 ntBASIC20.07■□□□□ 0.8
APAF1O14727 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.07■□□□□ 0.8
APAF1O14727 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.07■□□□□ 0.8
APAF1O14727 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
APAF1O14727 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
APAF1O14727 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC20.07■□□□□ 0.8
APAF1O14727 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.07■□□□□ 0.8
APAF1O14727 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
APAF1O14727 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 FGD5P1-202ENST00000614866 2498 ntBASIC20.07■□□□□ 0.8
APAF1O14727 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
APAF1O14727 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC20.07■□□□□ 0.8
APAF1O14727 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 KRT8P35-201ENST00000483942 1338 ntBASIC20.06■□□□□ 0.8
APAF1O14727 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
APAF1O14727 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.06■□□□□ 0.8
APAF1O14727 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.06■□□□□ 0.8
APAF1O14727 AC106760.1-201ENST00000508690 800 ntBASIC20.06■□□□□ 0.8
APAF1O14727 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 PTP4A1P2-201ENST00000546033 454 ntBASIC20.06■□□□□ 0.8
APAF1O14727 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.06■□□□□ 0.8
APAF1O14727 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.06■□□□□ 0.8
APAF1O14727 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 AC023090.2-201ENST00000625182 2110 ntBASIC20.06■□□□□ 0.8
APAF1O14727 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
APAF1O14727 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APAF1O14727 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC20.06■□□□□ 0.8
APAF1O14727 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 AC106881.1-201ENST00000605849 3329 ntBASIC20.05■□□□□ 0.8
APAF1O14727 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
APAF1O14727 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC20.05■□□□□ 0.8
APAF1O14727 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APAF1O14727 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms