Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC092612.1-201ENST00000514501 998 ntBASIC23.79■■□□□ 1.4
CHD1O14646 GPX3-202ENST00000517973 612 ntTSL 3 BASIC23.79■■□□□ 1.4
CHD1O14646 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC23.79■■□□□ 1.4
CHD1O14646 IGHVIII-5-2-201ENST00000522505 261 ntBASIC23.79■■□□□ 1.4
CHD1O14646 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD1O14646 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC23.79■■□□□ 1.4
CHD1O14646 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD1O14646 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD1O14646 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD1O14646 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD1O14646 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CHD1O14646 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 AC136604.1-202ENST00000425471 771 ntBASIC23.78■■□□□ 1.4
CHD1O14646 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC23.78■■□□□ 1.4
CHD1O14646 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC23.78■■□□□ 1.4
CHD1O14646 MED11-202ENST00000573708 802 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD1O14646 AL591424.3-201ENST00000614278 872 ntBASIC23.78■■□□□ 1.4
CHD1O14646 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CHD1O14646 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC23.78■■□□□ 1.4
CHD1O14646 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD1O14646 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC23.77■■□□□ 1.4
CHD1O14646 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 AL513523.2-202ENST00000427283 2040 ntBASIC23.77■■□□□ 1.4
CHD1O14646 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CHD1O14646 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC23.77■■□□□ 1.4
CHD1O14646 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC23.77■■□□□ 1.4
CHD1O14646 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC23.77■■□□□ 1.4
CHD1O14646 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC23.77■■□□□ 1.4
CHD1O14646 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD1O14646 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 AP002353.1-201ENST00000528257 1599 ntBASIC23.77■■□□□ 1.4
CHD1O14646 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD1O14646 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CHD1O14646 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 NQO2-204ENST00000380454 851 ntTSL 2 BASIC23.76■■□□□ 1.39
CHD1O14646 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC23.76■■□□□ 1.39
CHD1O14646 AC113347.2-201ENST00000512350 279 ntBASIC23.76■■□□□ 1.39
CHD1O14646 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC23.76■■□□□ 1.39
CHD1O14646 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 KRT18P37-201ENST00000520711 1282 ntBASIC23.76■■□□□ 1.39
CHD1O14646 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC23.76■■□□□ 1.39
CHD1O14646 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC23.76■■□□□ 1.39
CHD1O14646 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC23.76■■□□□ 1.39
CHD1O14646 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
CHD1O14646 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC23.76■■□□□ 1.39
CHD1O14646 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC23.76■■□□□ 1.39
CHD1O14646 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 GOLGA6L16P-201ENST00000441780 1299 ntBASIC23.76■■□□□ 1.39
CHD1O14646 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC23.76■■□□□ 1.39
CHD1O14646 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD1O14646 AC006529.1-201ENST00000459978 637 ntBASIC23.76■■□□□ 1.39
CHD1O14646 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD1O14646 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD1O14646 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC23.75■■□□□ 1.39
CHD1O14646 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms