Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.97■□□□□ 0.15
SOX1O00570 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.97■□□□□ 0.15
SOX1O00570 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SOX1O00570 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SOX1O00570 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.97■□□□□ 0.15
SOX1O00570 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.97■□□□□ 0.15
SOX1O00570 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.97■□□□□ 0.15
SOX1O00570 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.97■□□□□ 0.15
SOX1O00570 AC053503.3-201ENST00000448375 114 ntBASIC15.97■□□□□ 0.15
SOX1O00570 AL590235.1-201ENST00000564650 861 ntBASIC15.97■□□□□ 0.15
SOX1O00570 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.97■□□□□ 0.15
SOX1O00570 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SOX1O00570 AL512324.3-201ENST00000619383 882 ntBASIC15.97■□□□□ 0.15
SOX1O00570 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.97■□□□□ 0.15
SOX1O00570 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 AC020910.5-201ENST00000623668 1865 ntBASIC15.97■□□□□ 0.15
SOX1O00570 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.97■□□□□ 0.15
SOX1O00570 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.97■□□□□ 0.15
SOX1O00570 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SOX1O00570 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SOX1O00570 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SOX1O00570 UBALD1-205ENST00000590891 2641 ntBASIC15.96■□□□□ 0.15
SOX1O00570 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SOX1O00570 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SOX1O00570 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SOX1O00570 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SOX1O00570 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SOX1O00570 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SOX1O00570 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 GUSBP10-201ENST00000417412 665 ntBASIC15.96■□□□□ 0.15
SOX1O00570 OR51A9P-201ENST00000422578 911 ntBASIC15.96■□□□□ 0.15
SOX1O00570 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.96■□□□□ 0.15
SOX1O00570 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 AC010900.1-201ENST00000449849 1296 ntBASIC15.96■□□□□ 0.15
SOX1O00570 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC15.96■□□□□ 0.15
SOX1O00570 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.96■□□□□ 0.15
SOX1O00570 DUX4L47-201ENST00000566374 394 ntBASIC15.96■□□□□ 0.15
SOX1O00570 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 CYP4F36P-201ENST00000589193 186 ntBASIC15.96■□□□□ 0.15
SOX1O00570 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC15.96■□□□□ 0.15
SOX1O00570 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.96■□□□□ 0.15
SOX1O00570 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 MIR6720-201ENST00000611664 98 ntBASIC15.96■□□□□ 0.15
SOX1O00570 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.96■□□□□ 0.15
SOX1O00570 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SOX1O00570 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.96■□□□□ 0.15
SOX1O00570 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SOX1O00570 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SOX1O00570 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX1O00570 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX1O00570 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX1O00570 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX1O00570 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SOX1O00570 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SOX1O00570 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
SOX1O00570 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SOX1O00570 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.95■□□□□ 0.14
SOX1O00570 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SOX1O00570 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SOX1O00570 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SOX1O00570 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.95■□□□□ 0.14
SOX1O00570 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms