Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 HOMER2P2-201ENST00000451621 847 ntBASIC15.16■□□□□ 0.02
TLR4O00206 AC104306.2-201ENST00000451877 341 ntBASIC15.16■□□□□ 0.02
TLR4O00206 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.16■□□□□ 0.02
TLR4O00206 AC004066.1-201ENST00000502488 802 ntBASIC15.16■□□□□ 0.02
TLR4O00206 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.16■□□□□ 0.02
TLR4O00206 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.16■□□□□ 0.02
TLR4O00206 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TLR4O00206 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TLR4O00206 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.15■□□□□ 0.02
TLR4O00206 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 AL645937.2-201ENST00000396808 931 ntBASIC15.15■□□□□ 0.02
TLR4O00206 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.15■□□□□ 0.02
TLR4O00206 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.15■□□□□ 0.02
TLR4O00206 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.15■□□□□ 0.02
TLR4O00206 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.15■□□□□ 0.02
TLR4O00206 ECM1P1-201ENST00000604092 1279 ntBASIC15.15■□□□□ 0.02
TLR4O00206 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 AC084346.2-201ENST00000607097 949 ntBASIC15.15■□□□□ 0.02
TLR4O00206 AL139099.5-201ENST00000635274 300 ntBASIC15.15■□□□□ 0.02
TLR4O00206 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 LRRC59-203ENST00000576448 1531 ntBASIC15.15■□□□□ 0.02
TLR4O00206 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.15■□□□□ 0.02
TLR4O00206 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.15■□□□□ 0.02
TLR4O00206 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TLR4O00206 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TLR4O00206 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TLR4O00206 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.14■□□□□ 0.01
TLR4O00206 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TLR4O00206 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.14■□□□□ 0.01
TLR4O00206 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 AL354989.2-201ENST00000435838 1540 ntBASIC15.14■□□□□ 0.01
TLR4O00206 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.14■□□□□ 0.01
TLR4O00206 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TLR4O00206 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms