Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 KRT18P32-201ENST00000424695 1287 ntBASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 SPDYE17-201ENST00000412399 783 ntBASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 HIST3H2BA-201ENST00000436555 524 ntBASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 MTDHP5-201ENST00000598980 586 ntBASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GOLGA6L4A6NEF3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 MTND6P24-201ENST00000440466 518 ntBASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 BANF1P1-201ENST00000553684 263 ntBASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GOLGA6L4A6NEF3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms