Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HFM1A2PYH4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 KRTAP10-13P-201ENST00000412914 571 ntBASIC22.23■■□□□ 1.15
HFM1A2PYH4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AC104306.2-201ENST00000451877 341 ntBASIC22.23■■□□□ 1.15
HFM1A2PYH4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AC104982.3-201ENST00000581995 514 ntBASIC22.23■■□□□ 1.15
HFM1A2PYH4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 CICP23-201ENST00000605013 2741 ntBASIC22.23■■□□□ 1.15
HFM1A2PYH4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC22.23■■□□□ 1.15
HFM1A2PYH4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HFM1A2PYH4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 AC013726.1-201ENST00000563747 2285 ntBASIC22.22■■□□□ 1.15
HFM1A2PYH4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HFM1A2PYH4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
HFM1A2PYH4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 HYMAI-201ENST00000635591 3347 ntBASIC22.21■■□□□ 1.15
HFM1A2PYH4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 GPAA1P2-201ENST00000417923 928 ntBASIC22.21■■□□□ 1.15
HFM1A2PYH4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 ATP6V0CP2-201ENST00000469409 207 ntBASIC22.21■■□□□ 1.15
HFM1A2PYH4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 AC008825.2-201ENST00000603374 718 ntBASIC22.21■■□□□ 1.15
HFM1A2PYH4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 HR-201ENST00000312841 5351 ntTSL 5 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC22.21■■□□□ 1.15
HFM1A2PYH4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms