Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMG5Q9UPR3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AC023908.3-201ENST00000564211 3047 ntBASIC16.16■□□□□ 0.18
SMG5Q9UPR3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 FO681548.1-201ENST00000455617 1132 ntBASIC16.16■□□□□ 0.18
SMG5Q9UPR3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 TIMM17BP1-201ENST00000545713 516 ntBASIC16.16■□□□□ 0.18
SMG5Q9UPR3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AL022328.1-201ENST00000610050 478 ntBASIC16.16■□□□□ 0.18
SMG5Q9UPR3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 AP001282.1-201ENST00000531301 1499 ntBASIC16.16■□□□□ 0.18
SMG5Q9UPR3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.16■□□□□ 0.18
SMG5Q9UPR3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 AC005229.1-201ENST00000392885 409 ntBASIC16.15■□□□□ 0.18
SMG5Q9UPR3 MIR1247-201ENST00000408206 136 ntBASIC16.15■□□□□ 0.18
SMG5Q9UPR3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 RARRES2P5-201ENST00000564013 466 ntBASIC16.15■□□□□ 0.18
SMG5Q9UPR3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 AC005089.1-201ENST00000619486 2241 ntBASIC16.15■□□□□ 0.18
SMG5Q9UPR3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMG5Q9UPR3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SMG5Q9UPR3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
SMG5Q9UPR3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SMG5Q9UPR3 PCDHA3-202ENST00000532566 4594 ntBASIC16.14■□□□□ 0.18
SMG5Q9UPR3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG5Q9UPR3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SMG5Q9UPR3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG5Q9UPR3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SMG5Q9UPR3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.14■□□□□ 0.17
SMG5Q9UPR3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMG5Q9UPR3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SMG5Q9UPR3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms