Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ECHDC1Q9NTX5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 KRT8P35-201ENST00000483942 1338 ntBASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 EIF3FP3-201ENST00000434851 1086 ntBASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 AC022616.1-201ENST00000518688 554 ntBASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.59■□□□□ 0.57
ECHDC1Q9NTX5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 AL596257.1-201ENST00000641463 2694 ntBASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ECHDC1Q9NTX5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 TMEM14DP-201ENST00000422205 345 ntBASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 TTTY23B-201ENST00000442790 549 ntBASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 AP001889.1-201ENST00000525414 633 ntBASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 CR383656.12-201ENST00000549567 513 ntBASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.58■□□□□ 0.56
ECHDC1Q9NTX5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 GIMAP3P-201ENST00000495150 836 ntBASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AC015936.2-201ENST00000593177 259 ntBASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AC008735.3-201ENST00000596646 500 ntBASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ECHDC1Q9NTX5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms