Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 MIR33B-201ENST00000385104 96 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 GHSR-202ENST00000427970 912 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 RNMTL1P1-201ENST00000454103 560 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 NUP210P1-202ENST00000504322 710 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 RN7SL574P-201ENST00000581512 297 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 BNIP3P13-201ENST00000599968 566 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 AC079336.7-201ENST00000623428 1078 ntBASIC16.13■□□□□ 0.17
TLR9Q9NR96 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR9Q9NR96 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR9Q9NR96 AC024909.3-201ENST00000611513 2257 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 AC105917.1-201ENST00000506637 2539 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 MST1L-201ENST00000442552 2185 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 RPL17P11-201ENST00000417593 544 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 AC007274.2-201ENST00000421675 662 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 MESTP3-201ENST00000503460 968 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 AC010491.1-201ENST00000563101 2797 ntBASIC16.12■□□□□ 0.17
TLR9Q9NR96 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR9Q9NR96 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR9Q9NR96 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR9Q9NR96 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.11■□□□□ 0.17
TLR9Q9NR96 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms