Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC004790.1-201ENST00000612686 536 ntBASIC14.65□□□□□ -0.06
BRF2Q9HAW0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AL662799.1-202ENST00000614205 422 ntBASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
BRF2Q9HAW0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 SPDYE19P-201ENST00000338590 713 ntBASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PMS2P2-201ENST00000425039 1128 ntBASIC14.64□□□□□ -0.07
BRF2Q9HAW0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 BRI3BPP1-201ENST00000594224 787 ntBASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BRF2Q9HAW0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AL158070.2-201ENST00000623713 1621 ntBASIC14.63□□□□□ -0.07
BRF2Q9HAW0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.63□□□□□ -0.07
BRF2Q9HAW0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms