Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 AC131212.3-201ENST00000624087 4219 ntBASIC18.86■□□□□ 0.61
UPF2Q9HAU5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 HSPA7-201ENST00000445535 1927 ntBASIC18.86■□□□□ 0.61
UPF2Q9HAU5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 AP3S2-216ENST00000617003 1561 ntBASIC18.86■□□□□ 0.61
UPF2Q9HAU5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 FO393414.2-201ENST00000405153 598 ntBASIC18.86■□□□□ 0.61
UPF2Q9HAU5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 SPCS2P4-201ENST00000436160 681 ntBASIC18.86■□□□□ 0.61
UPF2Q9HAU5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.86■□□□□ 0.61
UPF2Q9HAU5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPF2Q9HAU5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.85■□□□□ 0.61
UPF2Q9HAU5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 AL353705.2-201ENST00000428243 662 ntBASIC18.85■□□□□ 0.61
UPF2Q9HAU5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 AC243562.1-201ENST00000560672 389 ntBASIC18.85■□□□□ 0.61
UPF2Q9HAU5 AC106730.1-201ENST00000566722 1090 ntBASIC18.85■□□□□ 0.61
UPF2Q9HAU5 AC026120.1-201ENST00000611536 926 ntBASIC18.85■□□□□ 0.61
UPF2Q9HAU5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 AC097359.2-201ENST00000604992 2389 ntBASIC18.85■□□□□ 0.61
UPF2Q9HAU5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF2Q9HAU5 UXT-AS1-201ENST00000590504 1525 ntBASIC18.84■□□□□ 0.61
UPF2Q9HAU5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms