Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 TMEM198B-204ENST00000484016 896 ntBASIC12.47□□□□□ -0.41
NKX6-2Q9C056 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 AL365330.1-201ENST00000607459 531 ntBASIC12.47□□□□□ -0.41
NKX6-2Q9C056 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.47□□□□□ -0.41
NKX6-2Q9C056 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.47□□□□□ -0.41
NKX6-2Q9C056 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 ACE3P-201ENST00000423435 1973 ntBASIC12.47□□□□□ -0.41
NKX6-2Q9C056 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 PI4KAP1-204ENST00000612579 1703 ntBASIC12.46□□□□□ -0.41
NKX6-2Q9C056 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 KRT18P1-202ENST00000452408 1331 ntBASIC12.46□□□□□ -0.41
NKX6-2Q9C056 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 AC064862.7-201ENST00000604520 867 ntBASIC12.46□□□□□ -0.41
NKX6-2Q9C056 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
NKX6-2Q9C056 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.46□□□□□ -0.42
NKX6-2Q9C056 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX6-2Q9C056 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms