Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 KRT8P22-201ENST00000562317 1415 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 KRT18P64-201ENST00000434946 1219 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 FAM58CP-201ENST00000435741 640 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 AC069335.1-201ENST00000489972 472 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 AL662844.1-201ENST00000546340 181 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 SLC25A6P4-201ENST00000586535 553 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 AC055717.3-201ENST00000622967 595 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 UXT-AS1-201ENST00000590504 1525 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 Z97205.2-201ENST00000564697 1639 ntBASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.93□□□□□ -0.18
GABARAPL3Q9BY60 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AC079781.5-202ENST00000641784 3743 ntBASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AL133215.2-201ENST00000609242 977 ntBASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GABARAPL3Q9BY60 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms