Protein–RNA interactions for Protein: Q9BXW4

MAP1LC3C, Microtubule-associated proteins 1A/1B light chain 3C, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3CQ9BXW4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 KRT8P24-201ENST00000560290 1559 ntBASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 SIGLEC16-201ENST00000599858 1437 ntBASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
MAP1LC3CQ9BXW4 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 AC114271.1-201ENST00000612689 2813 ntBASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MIR718-201ENST00000390190 70 ntBASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 CD99P1-205ENST00000527459 561 ntBASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 AC005412.3-201ENST00000580309 715 ntBASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 Z99916.2-201ENST00000604037 246 ntBASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 AC020658.7-201ENST00000624274 2442 ntBASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MAP1LC3CQ9BXW4 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 BNIP3P1-202ENST00000550043 1585 ntBASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MAP1LC3CQ9BXW4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms