Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 COX5BP8-201ENST00000416911 349 ntBASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 NME2P1-201ENST00000426182 414 ntBASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 AC011495.1-201ENST00000498085 584 ntBASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 AC099568.2-201ENST00000609194 695 ntBASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 AL607033.1-201ENST00000623900 1599 ntBASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PCGF1Q9BSM1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 AC074338.1-201ENST00000416825 156 ntBASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 RPL13P2-201ENST00000440687 659 ntBASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 SLED1-202ENST00000512051 380 ntBASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 HNRNPUP1-201ENST00000554987 333 ntBASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 RRP7BP-205ENST00000566851 833 ntBASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 AC005089.1-201ENST00000619486 2241 ntBASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PCGF1Q9BSM1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CICP14-201ENST00000629111 2732 ntBASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 PCDHA3-202ENST00000532566 4594 ntBASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PCGF1Q9BSM1 AC097376.2-205ENST00000610159 5334 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms