Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.19□□□□□ -0.78
LITAFQ99732 NPAP1P7-201ENST00000613027 823 ntBASIC10.19□□□□□ -0.78
LITAFQ99732 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC10.19□□□□□ -0.78
LITAFQ99732 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LITAFQ99732 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.19□□□□□ -0.78
LITAFQ99732 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LITAFQ99732 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 AC126335.2-201ENST00000623362 4637 ntBASIC10.18□□□□□ -0.78
LITAFQ99732 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 AZGP1P1-201ENST00000411909 902 ntBASIC10.18□□□□□ -0.78
LITAFQ99732 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.18□□□□□ -0.78
LITAFQ99732 MIR1199-201ENST00000621445 119 ntBASIC10.18□□□□□ -0.78
LITAFQ99732 AL645728.2-202ENST00000641679 227 ntBASIC10.18□□□□□ -0.78
LITAFQ99732 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.18□□□□□ -0.78
LITAFQ99732 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.18□□□□□ -0.78
LITAFQ99732 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LITAFQ99732 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 AC111170.3-201ENST00000624282 2464 ntBASIC10.17□□□□□ -0.78
LITAFQ99732 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.17□□□□□ -0.78
LITAFQ99732 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LITAFQ99732 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms