Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 AC125604.1-201ENST00000496255 707 ntBASIC16.12■□□□□ 0.17
CASD1Q96PB1 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.12■□□□□ 0.17
CASD1Q96PB1 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 AL160314.3-201ENST00000556041 767 ntBASIC16.12■□□□□ 0.17
CASD1Q96PB1 SNORD3B-2-202ENST00000571722 791 ntBASIC16.12■□□□□ 0.17
CASD1Q96PB1 AF254983.2-201ENST00000612331 135 ntBASIC16.12■□□□□ 0.17
CASD1Q96PB1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 AC079336.7-201ENST00000623428 1078 ntBASIC16.12■□□□□ 0.17
CASD1Q96PB1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASD1Q96PB1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CASD1Q96PB1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 KLF2P1-201ENST00000447438 1042 ntBASIC16.11■□□□□ 0.17
CASD1Q96PB1 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 AL161670.2-201ENST00000557650 1227 ntBASIC16.11■□□□□ 0.17
CASD1Q96PB1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 MIR3907-201ENST00000579424 151 ntBASIC16.11■□□□□ 0.17
CASD1Q96PB1 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 AC132192.2-201ENST00000596206 1147 ntBASIC16.11■□□□□ 0.17
CASD1Q96PB1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASD1Q96PB1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CASD1Q96PB1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASD1Q96PB1 FAM58BP-201ENST00000439056 645 ntBASIC16.1■□□□□ 0.17
CASD1Q96PB1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.1■□□□□ 0.17
CASD1Q96PB1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms