Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 AC084364.1-201ENST00000551967 1556 ntBASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 HLA-A-201ENST00000376802 1334 ntBASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 AC023090.2-201ENST00000625182 2110 ntBASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 GHSR-202ENST00000427970 912 ntBASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 PHKG1P2-201ENST00000457537 863 ntBASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 AL121894.2-201ENST00000602977 491 ntBASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 Z83851.2-201ENST00000609564 659 ntBASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP6Q96FZ7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 AC138969.3-201ENST00000546612 1459 ntBASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 AC138932.2-201ENST00000548268 1459 ntBASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 AC126755.4-201ENST00000549796 1459 ntBASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
CHMP6Q96FZ7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms