Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AL645937.2-201ENST00000396808 931 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 GHSR-202ENST00000427970 912 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AC093433.1-201ENST00000458048 571 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AP005019.2-201ENST00000615104 511 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 AC093525.8-201ENST00000624099 1342 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 AC126365.1-201ENST00000578585 1514 ntBASIC13.59□□□□□ -0.23
APH1AQ96BI3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.59□□□□□ -0.23
APH1AQ96BI3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APH1AQ96BI3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APH1AQ96BI3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
APH1AQ96BI3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APH1AQ96BI3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
APH1AQ96BI3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.58□□□□□ -0.23
APH1AQ96BI3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.58□□□□□ -0.23
APH1AQ96BI3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AL355864.2-201ENST00000447420 863 ntBASIC13.58□□□□□ -0.24
APH1AQ96BI3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AC068587.3-201ENST00000526613 355 ntBASIC13.58□□□□□ -0.24
APH1AQ96BI3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.58□□□□□ -0.24
APH1AQ96BI3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APH1AQ96BI3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.57□□□□□ -0.24
APH1AQ96BI3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
APH1AQ96BI3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms