Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 ACE3P-201ENST00000423435 1973 ntBASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 EEF1DP4-201ENST00000446006 880 ntBASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 AP001160.2-201ENST00000596071 487 ntBASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RTN4IP1Q8WWV3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTN4IP1Q8WWV3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AC005840.4-201ENST00000541242 2494 ntBASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms