Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SMIM4Q8WVI0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AL031008.1-201ENST00000619963 541 ntBASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AL645728.2-202ENST00000641679 227 ntBASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 AL591122.2-201ENST00000624125 1853 ntBASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SMIM4Q8WVI0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 FAM220BP-201ENST00000377689 816 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 TSPY19P-201ENST00000418461 509 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 TSPY18P-201ENST00000441642 509 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 RNPS1P1-201ENST00000507437 918 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AC091304.2-201ENST00000564639 760 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AC023141.13-201ENST00000604991 943 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AC026979.3-201ENST00000607315 403 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AC007064.4-201ENST00000637740 555 ntBASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms