Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 PPY2P-201ENST00000582808 702 ntBASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 ZACNP1-201ENST00000612259 710 ntBASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 AL023775.1-201ENST00000454907 1746 ntBASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NEDD1Q8NHV4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 AC015818.8-201ENST00000587907 1519 ntBASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 AC004945.1-201ENST00000416738 983 ntBASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 RPSAP36-202ENST00000494591 1261 ntBASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 RN7SL219P-201ENST00000582872 296 ntBASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 AC138696.2-201ENST00000607376 223 ntBASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEDD1Q8NHV4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AC023090.2-201ENST00000625182 2110 ntBASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AC006486.2-201ENST00000624246 2199 ntBASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 AL138725.1-201ENST00000407347 1314 ntBASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 INE2-201ENST00000630399 1874 ntBASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.67■□□□□ 0.42
NEDD1Q8NHV4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms