Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC9.27□□□□□ -0.92
SVIPQ8NHG7 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.92
SVIPQ8NHG7 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
SVIPQ8NHG7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC9.27□□□□□ -0.92
SVIPQ8NHG7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC9.27□□□□□ -0.92
SVIPQ8NHG7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
SVIPQ8NHG7 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 AL139424.2-202ENST00000641335 1369 ntBASIC9.27□□□□□ -0.93
SVIPQ8NHG7 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 DNASE1L3-206ENST00000483681 2099 ntTSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 XKRY2-202ENST00000623874 1581 ntBASIC9.27□□□□□ -0.93
SVIPQ8NHG7 XKRY-202ENST00000624960 1581 ntBASIC9.27□□□□□ -0.93
SVIPQ8NHG7 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 SPDYE3-201ENST00000332397 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 EIF3CL-202ENST00000398944 3053 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 SCARA3-201ENST00000301904 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 HLA-F-AS1-209ENST00000458236 2835 ntBASIC9.27□□□□□ -0.93
SVIPQ8NHG7 TMEM55A-201ENST00000285419 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SVIPQ8NHG7 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 HHAT-209ENST00000545781 2864 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 RHO-201ENST00000296271 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 GBA-202ENST00000368373 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 SLC22A14-202ENST00000448498 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 AL358781.1-202ENST00000321081 1360 ntBASIC9.26□□□□□ -0.93
SVIPQ8NHG7 AC123912.3-201ENST00000600907 1367 ntBASIC9.26□□□□□ -0.93
SVIPQ8NHG7 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ANO7L1-203ENST00000602586 1720 ntBASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ABR-201ENST00000291107 2673 ntTSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ATP6AP1L-201ENST00000380167 2503 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 AC068987.2-201ENST00000565518 896 ntBASIC9.26□□□□□ -0.93
SVIPQ8NHG7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 HHAT-202ENST00000367009 2714 ntTSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 CAPN3-205ENST00000357568 2669 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 USP48-203ENST00000374732 3037 ntTSL 2 BASIC9.26□□□□□ -0.93
SVIPQ8NHG7 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms