Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.44□□□□□ -0.26
CPEB3Q8NE35 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 MROH4P-201ENST00000431302 1578 ntBASIC13.43□□□□□ -0.26
CPEB3Q8NE35 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AC092552.1-201ENST00000547243 906 ntBASIC13.43□□□□□ -0.26
CPEB3Q8NE35 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AC138761.1-201ENST00000584393 385 ntBASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AC008494.3-201ENST00000606615 944 ntBASIC13.43□□□□□ -0.26
CPEB3Q8NE35 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 CICP14-201ENST00000629111 2732 ntBASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPEB3Q8NE35 AL359258.3-201ENST00000622910 2331 ntBASIC13.42□□□□□ -0.26
CPEB3Q8NE35 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 AC104457.1-201ENST00000401024 814 ntBASIC13.42□□□□□ -0.26
CPEB3Q8NE35 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 RPL13AP25-201ENST00000484130 612 ntBASIC13.42□□□□□ -0.26
CPEB3Q8NE35 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 CTBP2P3-201ENST00000585629 1255 ntBASIC13.42□□□□□ -0.26
CPEB3Q8NE35 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 TMEM261P1-201ENST00000604899 340 ntBASIC13.42□□□□□ -0.26
CPEB3Q8NE35 AC107373.2-201ENST00000607735 490 ntBASIC13.42□□□□□ -0.26
CPEB3Q8NE35 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.42□□□□□ -0.26
CPEB3Q8NE35 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms