Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NGEFQ8N5V2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
NGEFQ8N5V2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
NGEFQ8N5V2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.08■□□□□ 0.8
NGEFQ8N5V2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
NGEFQ8N5V2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 FAM45BP-202ENST00000592932 1624 ntBASIC20.07■□□□□ 0.8
NGEFQ8N5V2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 AC104989.1-201ENST00000519711 778 ntBASIC20.07■□□□□ 0.8
NGEFQ8N5V2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 AP005019.2-201ENST00000615104 511 ntBASIC20.07■□□□□ 0.8
NGEFQ8N5V2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 MSTO2P-201ENST00000314835 1709 ntBASIC20.07■□□□□ 0.8
NGEFQ8N5V2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 PDIA3P1-201ENST00000471856 1510 ntBASIC20.07■□□□□ 0.8
NGEFQ8N5V2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NGEFQ8N5V2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 LINC00554-201ENST00000564841 3011 ntBASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ACTG1P3-201ENST00000431775 1114 ntBASIC20.06■□□□□ 0.8
NGEFQ8N5V2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 REXO1L6P-201ENST00000603433 1515 ntBASIC20.06■□□□□ 0.8
NGEFQ8N5V2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.06■□□□□ 0.8
NGEFQ8N5V2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 CTBP2P5-201ENST00000454986 1264 ntBASIC20.05■□□□□ 0.8
NGEFQ8N5V2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 AP005482.1-201ENST00000563722 1273 ntBASIC20.05■□□□□ 0.8
NGEFQ8N5V2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 AL033527.4-201ENST00000641026 673 ntBASIC20.05■□□□□ 0.8
NGEFQ8N5V2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
NGEFQ8N5V2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms