Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 AP001267.2-201ENST00000532619 2086 ntBASIC13.91□□□□□ -0.18
SHFQ7M4L6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CEND1P1-201ENST00000451006 455 ntBASIC13.91□□□□□ -0.18
SHFQ7M4L6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 ALG1L8P-201ENST00000533887 760 ntBASIC13.91□□□□□ -0.18
SHFQ7M4L6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 AC105021.1-202ENST00000570572 669 ntBASIC13.91□□□□□ -0.18
SHFQ7M4L6 AC018529.1-201ENST00000613063 361 ntBASIC13.91□□□□□ -0.18
SHFQ7M4L6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 AC105339.1-204ENST00000636249 355 ntBASIC13.91□□□□□ -0.18
SHFQ7M4L6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SHFQ7M4L6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHFQ7M4L6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 MIR574-201ENST00000385209 96 ntBASIC13.9□□□□□ -0.18
SHFQ7M4L6 KRT18P32-201ENST00000424695 1287 ntBASIC13.9□□□□□ -0.18
SHFQ7M4L6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 AC005829.1-201ENST00000570002 483 ntBASIC13.9□□□□□ -0.18
SHFQ7M4L6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SHFQ7M4L6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHFQ7M4L6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms