Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
FAM78BQ5VT40 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 DMBT1P1-203ENST00000636837 4628 ntBASIC12.25□□□□□ -0.45
FAM78BQ5VT40 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 KRT18P2-201ENST00000447938 1258 ntBASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 RNA5SP416-201ENST00000516838 111 ntBASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 KRT19P2-202ENST00000557173 1012 ntBASIC12.25□□□□□ -0.45
FAM78BQ5VT40 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 MBLAC2-202ENST00000514906 1936 ntBASIC12.25□□□□□ -0.45
FAM78BQ5VT40 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
FAM78BQ5VT40 COL6A4P2-202ENST00000504443 2753 ntBASIC12.24□□□□□ -0.45
FAM78BQ5VT40 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 MED15P5-201ENST00000423150 992 ntBASIC12.24□□□□□ -0.45
FAM78BQ5VT40 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.24□□□□□ -0.45
FAM78BQ5VT40 AL591424.1-201ENST00000442569 1213 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms