Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VBP1P61758 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 RBM17P3-201ENST00000417687 1192 ntBASIC13.79□□□□□ -0.2
VBP1P61758 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.79□□□□□ -0.2
VBP1P61758 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.79□□□□□ -0.2
VBP1P61758 SART3-203ENST00000546611 1184 ntBASIC13.79□□□□□ -0.2
VBP1P61758 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.79□□□□□ -0.2
VBP1P61758 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.79□□□□□ -0.2
VBP1P61758 MTDHP3-201ENST00000594186 672 ntBASIC13.79□□□□□ -0.2
VBP1P61758 AL078644.1-201ENST00000609881 752 ntBASIC13.79□□□□□ -0.2
VBP1P61758 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VBP1P61758 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.79□□□□□ -0.2
VBP1P61758 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VBP1P61758 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.79□□□□□ -0.2
VBP1P61758 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VBP1P61758 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VBP1P61758 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
VBP1P61758 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.78□□□□□ -0.2
VBP1P61758 AC104076.2-201ENST00000448912 469 ntBASIC13.78□□□□□ -0.2
VBP1P61758 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VBP1P61758 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.78□□□□□ -0.2
VBP1P61758 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
VBP1P61758 AC016397.2-201ENST00000624848 1985 ntBASIC13.78□□□□□ -0.2
VBP1P61758 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.78□□□□□ -0.2
VBP1P61758 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.78□□□□□ -0.2
VBP1P61758 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VBP1P61758 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VBP1P61758 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VBP1P61758 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VBP1P61758 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VBP1P61758 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VBP1P61758 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VBP1P61758 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VBP1P61758 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 AC004987.2-201ENST00000395959 1148 ntBASIC13.77□□□□□ -0.21
VBP1P61758 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VBP1P61758 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.77□□□□□ -0.21
VBP1P61758 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.77□□□□□ -0.21
VBP1P61758 GHSR-202ENST00000427970 912 ntBASIC13.77□□□□□ -0.21
VBP1P61758 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms