Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.07□□□□□ -0.16
CDC42P60953 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 KRT126P-201ENST00000549467 1181 ntBASIC14.07□□□□□ -0.16
CDC42P60953 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC42P60953 PDPK2P-202ENST00000562415 1191 ntBASIC14.07□□□□□ -0.16
CDC42P60953 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.07□□□□□ -0.16
CDC42P60953 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CDC42P60953 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 Z83851.2-201ENST00000609564 659 ntBASIC14.07□□□□□ -0.16
CDC42P60953 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.07□□□□□ -0.16
CDC42P60953 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDC42P60953 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CDC42P60953 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CDC42P60953 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42P60953 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC42P60953 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDC42P60953 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42P60953 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.07□□□□□ -0.16
CDC42P60953 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CDC42P60953 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.06□□□□□ -0.16
CDC42P60953 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 RN7SL589P-201ENST00000481268 310 ntBASIC14.06□□□□□ -0.16
CDC42P60953 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.06□□□□□ -0.16
CDC42P60953 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.06□□□□□ -0.16
CDC42P60953 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.06□□□□□ -0.16
CDC42P60953 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42P60953 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42P60953 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDC42P60953 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDC42P60953 AC152010.1-201ENST00000415779 2006 ntBASIC14.05□□□□□ -0.16
CDC42P60953 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDC42P60953 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42P60953 TFAMP1-201ENST00000412727 736 ntBASIC14.05□□□□□ -0.16
CDC42P60953 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.05□□□□□ -0.16
CDC42P60953 FAM86C2P-203ENST00000528684 1004 ntBASIC14.05□□□□□ -0.16
CDC42P60953 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDC42P60953 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDC42P60953 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CDC42P60953 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms