Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
CMC4P56277 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
CMC4P56277 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.4□□□□□ -0.59
CMC4P56277 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
CMC4P56277 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 KRT8P35-201ENST00000483942 1338 ntBASIC11.39□□□□□ -0.59
CMC4P56277 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 AC105917.1-201ENST00000506637 2539 ntBASIC11.39□□□□□ -0.59
CMC4P56277 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.39□□□□□ -0.59
CMC4P56277 AC005229.1-201ENST00000392885 409 ntBASIC11.39□□□□□ -0.59
CMC4P56277 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 ACTBP8-201ENST00000403258 1108 ntBASIC11.39□□□□□ -0.59
CMC4P56277 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 KRT8P14-201ENST00000414254 1442 ntBASIC11.39□□□□□ -0.59
CMC4P56277 COX5BP8-201ENST00000416911 349 ntBASIC11.39□□□□□ -0.59
CMC4P56277 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.39□□□□□ -0.59
CMC4P56277 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.39□□□□□ -0.59
CMC4P56277 AC012441.1-201ENST00000446669 685 ntBASIC11.39□□□□□ -0.59
CMC4P56277 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 INE1-201ENST00000456273 945 ntBASIC11.39□□□□□ -0.59
CMC4P56277 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.39□□□□□ -0.59
CMC4P56277 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 RN7SL837P-201ENST00000463010 287 ntBASIC11.39□□□□□ -0.59
CMC4P56277 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 AC068587.3-201ENST00000526613 355 ntBASIC11.39□□□□□ -0.59
CMC4P56277 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.39□□□□□ -0.59
CMC4P56277 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 AC106886.1-201ENST00000568660 600 ntBASIC11.39□□□□□ -0.59
CMC4P56277 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.39□□□□□ -0.59
CMC4P56277 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CMC4P56277 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CMC4P56277 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.38□□□□□ -0.59
CMC4P56277 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 AL158070.2-201ENST00000623713 1621 ntBASIC11.38□□□□□ -0.59
CMC4P56277 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CMC4P56277 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
CMC4P56277 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CMC4P56277 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.38□□□□□ -0.59
CMC4P56277 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
CMC4P56277 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CMC4P56277 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.38□□□□□ -0.59
CMC4P56277 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CMC4P56277 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CMC4P56277 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms