Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.23□□□□□ -0.29
HCFC1P51610 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.23□□□□□ -0.29
HCFC1P51610 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.23□□□□□ -0.29
HCFC1P51610 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 HLA-K-203ENST00000430151 1046 ntBASIC13.23□□□□□ -0.29
HCFC1P51610 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.23□□□□□ -0.29
HCFC1P51610 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.23□□□□□ -0.29
HCFC1P51610 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.23□□□□□ -0.29
HCFC1P51610 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.23□□□□□ -0.29
HCFC1P51610 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.23□□□□□ -0.29
HCFC1P51610 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.23□□□□□ -0.29
HCFC1P51610 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HCFC1P51610 DBET-201ENST00000630918 3363 ntBASIC13.23□□□□□ -0.29
HCFC1P51610 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 AC126177.1-201ENST00000547829 2218 ntBASIC13.23□□□□□ -0.29
HCFC1P51610 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HCFC1P51610 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.23□□□□□ -0.29
HCFC1P51610 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.23□□□□□ -0.29
HCFC1P51610 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HCFC1P51610 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HCFC1P51610 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 AC234782.1-201ENST00000451950 919 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HCFC1P51610 HLA-J-204ENST00000495278 958 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 AC106794.1-201ENST00000506935 792 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HCFC1P51610 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.22□□□□□ -0.29
HCFC1P51610 AC138466.3-201ENST00000619983 221 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 AL008718.2-201ENST00000609206 1313 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HCFC1P51610 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HCFC1P51610 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HCFC1P51610 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.22□□□□□ -0.29
HCFC1P51610 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.22□□□□□ -0.29
HCFC1P51610 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HCFC1P51610 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 DPM3-202ENST00000368399 517 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 AL008707.1-201ENST00000422498 534 ntBASIC13.22□□□□□ -0.29
HCFC1P51610 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HCFC1P51610 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms