Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CDC34P49427 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CDC34P49427 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CDC34P49427 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
CDC34P49427 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC34P49427 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC34P49427 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.17□□□□□ -0.46
CDC34P49427 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC34P49427 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.17□□□□□ -0.46
CDC34P49427 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.17□□□□□ -0.46
CDC34P49427 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.17□□□□□ -0.46
CDC34P49427 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 AP000845.1-201ENST00000581677 2131 ntBASIC12.17□□□□□ -0.46
CDC34P49427 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 AL136982.4-201ENST00000437689 1740 ntBASIC12.17□□□□□ -0.46
CDC34P49427 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.17□□□□□ -0.46
CDC34P49427 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CDC34P49427 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
CDC34P49427 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CDC34P49427 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.16□□□□□ -0.46
CDC34P49427 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.16□□□□□ -0.46
CDC34P49427 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.16□□□□□ -0.46
CDC34P49427 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms