Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NR2F1-AS1-213ENST00000607797 3380 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 ATF4P4-201ENST00000393544 1930 ntBASIC10.09□□□□□ -0.79
PCP4P48539 RPP14-201ENST00000295959 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC10.09□□□□□ -0.79
PCP4P48539 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 KRT8P22-201ENST00000562317 1415 ntBASIC10.09□□□□□ -0.79
PCP4P48539 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 PXK-203ENST00000383715 1756 ntTSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 TSPYL6-201ENST00000317802 3089 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
PCP4P48539 NBPF17P-201ENST00000401087 2119 ntBASIC10.09□□□□□ -0.79
PCP4P48539 ABCB9-204ENST00000392439 3791 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 AC009108.4-201ENST00000623284 2451 ntBASIC10.09□□□□□ -0.79
PCP4P48539 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 KRT17P1-201ENST00000399211 1546 ntBASIC10.09□□□□□ -0.79
PCP4P48539 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 REXO1L8P-201ENST00000604378 1897 ntBASIC10.09□□□□□ -0.79
PCP4P48539 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC10.09□□□□□ -0.79
PCP4P48539 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 CAHM-201ENST00000604200 896 ntBASIC10.09□□□□□ -0.79
PCP4P48539 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC10.09□□□□□ -0.79
PCP4P48539 GFM1-201ENST00000264263 3453 ntTSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 AC010307.3-202ENST00000515122 3142 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 M1AP-209ENST00000536235 2531 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 AC004453.2-201ENST00000624861 2153 ntBASIC10.09□□□□□ -0.79
PCP4P48539 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 MIR9-3HG-203ENST00000546186 2718 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 POLR2M-202ENST00000380557 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 PMPCAP1-201ENST00000508114 1576 ntBASIC10.09□□□□□ -0.79
PCP4P48539 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC10.09□□□□□ -0.79
PCP4P48539 DDR1-223ENST00000324771 4148 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
PCP4P48539 AL512383.1-201ENST00000624175 2677 ntBASIC10.09□□□□□ -0.79
PCP4P48539 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
PCP4P48539 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 ZNF436-202ENST00000374608 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PCP4P48539 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
PCP4P48539 AC055811.4-201ENST00000624039 1754 ntBASIC10.09□□□□□ -0.79
PCP4P48539 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 F7-206ENST00000541084 2873 ntTSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 FRMD1-201ENST00000283309 3067 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC10.08□□□□□ -0.8
PCP4P48539 LINC01311-201ENST00000565162 1445 ntBASIC10.08□□□□□ -0.8
PCP4P48539 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC10.08□□□□□ -0.8
PCP4P48539 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 AC007608.4-201ENST00000623140 3365 ntBASIC10.08□□□□□ -0.8
PCP4P48539 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC10.08□□□□□ -0.8
PCP4P48539 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 DNAJC17-201ENST00000220496 3731 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms