Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.05■□□□□ 0
CXCL12P48061 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CXCL12P48061 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CXCL12P48061 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.05■□□□□ 0
CXCL12P48061 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CXCL12P48061 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.05■□□□□ 0
CXCL12P48061 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.05■□□□□ 0
CXCL12P48061 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.05■□□□□ 0
CXCL12P48061 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.05■□□□□ -0
CXCL12P48061 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.05■□□□□ -0
CXCL12P48061 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.05■□□□□ -0
CXCL12P48061 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.05■□□□□ -0
CXCL12P48061 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.05■□□□□ -0
CXCL12P48061 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CXCL12P48061 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.05■□□□□ -0
CXCL12P48061 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.05■□□□□ -0
CXCL12P48061 AC009084.3-201ENST00000623356 437 ntBASIC15.05■□□□□ -0
CXCL12P48061 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.05■□□□□ -0
CXCL12P48061 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 FAM90A2P-201ENST00000511144 1395 ntBASIC15.05■□□□□ -0
CXCL12P48061 FAM90A25P-201ENST00000528404 1395 ntBASIC15.05■□□□□ -0
CXCL12P48061 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
CXCL12P48061 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.05■□□□□ -0
CXCL12P48061 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.05■□□□□ -0
CXCL12P48061 AC244394.1-201ENST00000435000 1665 ntBASIC15.05■□□□□ -0
CXCL12P48061 MBLAC2-202ENST00000514906 1936 ntBASIC15.05■□□□□ -0
CXCL12P48061 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.05■□□□□ -0
CXCL12P48061 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CXCL12P48061 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.04■□□□□ -0
CXCL12P48061 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.04■□□□□ -0
CXCL12P48061 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 FAM90A7P-201ENST00000382628 1395 ntBASIC15.04■□□□□ -0
CXCL12P48061 FAM90A23P-201ENST00000400136 1395 ntBASIC15.04■□□□□ -0
CXCL12P48061 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.04■□□□□ -0
CXCL12P48061 AL592076.1-201ENST00000424448 303 ntBASIC15.04■□□□□ -0
CXCL12P48061 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.04■□□□□ -0
CXCL12P48061 KLF2P1-201ENST00000447438 1042 ntBASIC15.04■□□□□ -0
CXCL12P48061 AC079112.1-201ENST00000454972 939 ntBASIC15.04■□□□□ -0
CXCL12P48061 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.04■□□□□ -0
CXCL12P48061 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 AC008723.1-201ENST00000506922 207 ntBASIC15.04■□□□□ -0
CXCL12P48061 SCARNA21-201ENST00000517026 139 ntBASIC15.04■□□□□ -0
CXCL12P48061 AP002803.1-201ENST00000528836 498 ntBASIC15.04■□□□□ -0
CXCL12P48061 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.04■□□□□ -0
CXCL12P48061 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 AC026803.1-201ENST00000569130 274 ntBASIC15.04■□□□□ -0
CXCL12P48061 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CXCL12P48061 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.04■□□□□ -0
CXCL12P48061 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CXCL12P48061 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CXCL12P48061 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
CXCL12P48061 AL157414.3-201ENST00000624276 1954 ntBASIC15.04■□□□□ -0
CXCL12P48061 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.03■□□□□ -0
CXCL12P48061 AC020910.5-201ENST00000623668 1865 ntBASIC15.03■□□□□ -0
CXCL12P48061 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CXCL12P48061 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.03■□□□□ -0
CXCL12P48061 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms