Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 AC136604.1-201ENST00000418535 575 ntBASIC12.61□□□□□ -0.39
NKX2-1P43699 AC079781.3-201ENST00000449110 356 ntBASIC12.61□□□□□ -0.39
NKX2-1P43699 AC093909.1-201ENST00000504731 1122 ntBASIC12.61□□□□□ -0.39
NKX2-1P43699 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.61□□□□□ -0.39
NKX2-1P43699 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.61□□□□□ -0.39
NKX2-1P43699 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.61□□□□□ -0.39
NKX2-1P43699 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
NKX2-1P43699 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 AL031008.1-201ENST00000619963 541 ntBASIC12.61□□□□□ -0.39
NKX2-1P43699 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 AC005252.3-201ENST00000623855 2258 ntBASIC12.61□□□□□ -0.39
NKX2-1P43699 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 AP001267.2-201ENST00000532619 2086 ntBASIC12.61□□□□□ -0.39
NKX2-1P43699 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.61□□□□□ -0.39
NKX2-1P43699 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.61□□□□□ -0.39
NKX2-1P43699 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NKX2-1P43699 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 AC018442.1-201ENST00000421439 2061 ntBASIC12.6□□□□□ -0.39
NKX2-1P43699 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.6□□□□□ -0.39
NKX2-1P43699 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.6□□□□□ -0.39
NKX2-1P43699 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.6□□□□□ -0.39
NKX2-1P43699 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.6□□□□□ -0.39
NKX2-1P43699 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.6□□□□□ -0.39
NKX2-1P43699 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 AL138918.1-201ENST00000568306 659 ntBASIC12.6□□□□□ -0.39
NKX2-1P43699 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 AC026979.3-201ENST00000607315 403 ntBASIC12.6□□□□□ -0.39
NKX2-1P43699 FAM215A-202ENST00000632077 792 ntBASIC12.6□□□□□ -0.39
NKX2-1P43699 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.6□□□□□ -0.39
NKX2-1P43699 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
NKX2-1P43699 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NKX2-1P43699 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX2-1P43699 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX2-1P43699 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX2-1P43699 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.59□□□□□ -0.39
NKX2-1P43699 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX2-1P43699 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.59□□□□□ -0.39
NKX2-1P43699 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms