Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KDM5CP41229 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC22.33■■□□□ 1.16
KDM5CP41229 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC22.33■■□□□ 1.16
KDM5CP41229 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC22.33■■□□□ 1.16
KDM5CP41229 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KDM5CP41229 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC22.33■■□□□ 1.16
KDM5CP41229 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC22.33■■□□□ 1.16
KDM5CP41229 AC131206.1-201ENST00000538078 1211 ntBASIC22.33■■□□□ 1.16
KDM5CP41229 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC22.33■■□□□ 1.16
KDM5CP41229 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
KDM5CP41229 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KDM5CP41229 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC22.33■■□□□ 1.16
KDM5CP41229 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
KDM5CP41229 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC22.32■■□□□ 1.16
KDM5CP41229 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC22.32■■□□□ 1.16
KDM5CP41229 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC22.32■■□□□ 1.16
KDM5CP41229 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.32■■□□□ 1.16
KDM5CP41229 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC22.32■■□□□ 1.16
KDM5CP41229 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
KDM5CP41229 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC22.32■■□□□ 1.16
KDM5CP41229 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 AC107464.3-201ENST00000609172 737 ntBASIC22.32■■□□□ 1.16
KDM5CP41229 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.32■■□□□ 1.16
KDM5CP41229 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KDM5CP41229 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC22.31■■□□□ 1.16
KDM5CP41229 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 IL9RP3-201ENST00000442856 1674 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 AC007950.2-201ENST00000615045 2347 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC22.31■■□□□ 1.16
KDM5CP41229 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC22.31■■□□□ 1.16
KDM5CP41229 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC22.31■■□□□ 1.16
KDM5CP41229 RPSAP15-201ENST00000448168 861 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC22.31■■□□□ 1.16
KDM5CP41229 VPS18-202ENST00000558474 873 ntTSL 3 BASIC22.31■■□□□ 1.16
KDM5CP41229 NUDT4P2-201ENST00000578341 546 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 AL022334.2-201ENST00000610000 484 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 BX088702.1-201ENST00000610784 235 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 ZBED1P1-201ENST00000502364 1930 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC22.31■■□□□ 1.16
KDM5CP41229 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 LINC02199-201ENST00000506655 2702 ntBASIC22.31■■□□□ 1.16
KDM5CP41229 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
KDM5CP41229 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC22.3■■□□□ 1.16
KDM5CP41229 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
KDM5CP41229 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
KDM5CP41229 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC22.3■■□□□ 1.16
KDM5CP41229 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC22.3■■□□□ 1.16
KDM5CP41229 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 PSMD4P1-201ENST00000433951 1109 ntBASIC22.3■■□□□ 1.16
KDM5CP41229 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 NEU3-207ENST00000534628 746 ntTSL 2 BASIC22.3■■□□□ 1.16
KDM5CP41229 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC22.3■■□□□ 1.16
KDM5CP41229 MIR6769A-201ENST00000617340 73 ntBASIC22.3■■□□□ 1.16
KDM5CP41229 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC22.3■■□□□ 1.16
KDM5CP41229 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
KDM5CP41229 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC22.3■■□□□ 1.16
KDM5CP41229 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC22.3■■□□□ 1.16
KDM5CP41229 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
KDM5CP41229 AP005117.1-202ENST00000581724 1908 ntBASIC22.3■■□□□ 1.16
KDM5CP41229 API5-202ENST00000420461 2009 ntTSL 2 BASIC22.3■■□□□ 1.16
KDM5CP41229 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC22.3■■□□□ 1.16
KDM5CP41229 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
KDM5CP41229 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KDM5CP41229 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC22.29■■□□□ 1.16
KDM5CP41229 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms