Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.08□□□□□ -0.16
RFC3P40938 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RFC3P40938 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.08□□□□□ -0.16
RFC3P40938 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 AC127383.1-201ENST00000444697 1800 ntBASIC14.08□□□□□ -0.16
RFC3P40938 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RFC3P40938 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.08□□□□□ -0.16
RFC3P40938 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.08□□□□□ -0.16
RFC3P40938 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
RFC3P40938 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RFC3P40938 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.07□□□□□ -0.16
RFC3P40938 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 AL138799.1-201ENST00000448213 1675 ntBASIC14.07□□□□□ -0.16
RFC3P40938 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.07□□□□□ -0.16
RFC3P40938 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.07□□□□□ -0.16
RFC3P40938 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.07□□□□□ -0.16
RFC3P40938 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.07□□□□□ -0.16
RFC3P40938 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.07□□□□□ -0.16
RFC3P40938 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.07□□□□□ -0.16
RFC3P40938 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.07□□□□□ -0.16
RFC3P40938 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
RFC3P40938 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.07□□□□□ -0.16
RFC3P40938 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.07□□□□□ -0.16
RFC3P40938 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.07□□□□□ -0.16
RFC3P40938 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RFC3P40938 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RFC3P40938 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 NORAD-201ENST00000565493 5339 ntBASIC14.06□□□□□ -0.16
RFC3P40938 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RFC3P40938 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.06□□□□□ -0.16
RFC3P40938 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.06□□□□□ -0.16
RFC3P40938 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RFC3P40938 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.06□□□□□ -0.16
RFC3P40938 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.06□□□□□ -0.16
RFC3P40938 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RFC3P40938 AC016694.1-201ENST00000434179 700 ntBASIC14.06□□□□□ -0.16
RFC3P40938 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.06□□□□□ -0.16
RFC3P40938 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms