Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.66□□□□□ -0.06
KRT20P35900 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT20P35900 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.66□□□□□ -0.06
KRT20P35900 RNA5SP421-201ENST00000516864 134 ntBASIC14.66□□□□□ -0.06
KRT20P35900 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.66□□□□□ -0.06
KRT20P35900 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT20P35900 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.66□□□□□ -0.06
KRT20P35900 AC027796.2-201ENST00000575326 344 ntBASIC14.66□□□□□ -0.06
KRT20P35900 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT20P35900 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
KRT20P35900 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
KRT20P35900 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
KRT20P35900 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT20P35900 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT20P35900 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT20P35900 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT20P35900 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT20P35900 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.65□□□□□ -0.06
KRT20P35900 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
KRT20P35900 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 AC018892.3-201ENST00000623986 2499 ntBASIC14.65□□□□□ -0.06
KRT20P35900 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
KRT20P35900 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.65□□□□□ -0.06
KRT20P35900 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.65□□□□□ -0.06
KRT20P35900 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.65□□□□□ -0.06
KRT20P35900 AC092580.3-201ENST00000430932 139 ntBASIC14.65□□□□□ -0.06
KRT20P35900 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.65□□□□□ -0.06
KRT20P35900 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.65□□□□□ -0.06
KRT20P35900 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.65□□□□□ -0.06
KRT20P35900 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.65□□□□□ -0.06
KRT20P35900 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.65□□□□□ -0.06
KRT20P35900 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT20P35900 AL590560.3-201ENST00000623350 461 ntBASIC14.65□□□□□ -0.06
KRT20P35900 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 AC087386.2-201ENST00000623212 4637 ntBASIC14.65□□□□□ -0.06
KRT20P35900 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.65□□□□□ -0.06
KRT20P35900 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
KRT20P35900 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
KRT20P35900 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.65□□□□□ -0.06
KRT20P35900 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
KRT20P35900 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.65□□□□□ -0.07
KRT20P35900 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
KRT20P35900 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT20P35900 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT20P35900 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.64□□□□□ -0.07
KRT20P35900 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT20P35900 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT20P35900 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 SDHAP3-202ENST00000515467 728 ntBASIC14.64□□□□□ -0.07
KRT20P35900 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.64□□□□□ -0.07
KRT20P35900 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.64□□□□□ -0.07
KRT20P35900 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.64□□□□□ -0.07
KRT20P35900 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.64□□□□□ -0.07
KRT20P35900 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.64□□□□□ -0.07
KRT20P35900 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
KRT20P35900 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
KRT20P35900 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms