Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDE6GP18545 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
PDE6GP18545 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
PDE6GP18545 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
PDE6GP18545 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 NUTM2HP-201ENST00000442076 2498 ntBASIC9.49□□□□□ -0.89
PDE6GP18545 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
PDE6GP18545 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 AL845331.1-201ENST00000424978 1190 ntBASIC9.49□□□□□ -0.89
PDE6GP18545 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC9.49□□□□□ -0.89
PDE6GP18545 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC9.49□□□□□ -0.89
PDE6GP18545 AL589182.2-201ENST00000619332 1049 ntBASIC9.49□□□□□ -0.89
PDE6GP18545 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 AC004899.2-201ENST00000622993 3860 ntBASIC9.49□□□□□ -0.89
PDE6GP18545 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 AMT-221ENST00000538581 2038 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
PDE6GP18545 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
PDE6GP18545 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC9.49□□□□□ -0.89
PDE6GP18545 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
PDE6GP18545 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC9.49□□□□□ -0.89
PDE6GP18545 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
PDE6GP18545 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC9.48□□□□□ -0.89
PDE6GP18545 CETP-203ENST00000566128 1733 ntTSL 5 BASIC9.48□□□□□ -0.89
PDE6GP18545 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC9.48□□□□□ -0.89
PDE6GP18545 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.48□□□□□ -0.89
PDE6GP18545 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC9.48□□□□□ -0.89
PDE6GP18545 AC012508.2-201ENST00000567613 1472 ntBASIC9.48□□□□□ -0.89
PDE6GP18545 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
PDE6GP18545 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
PDE6GP18545 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
PDE6GP18545 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
PDE6GP18545 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms