Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HLA-DOBP13765 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.76□□□□□ -0.21
HLA-DOBP13765 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 CICP23-201ENST00000605013 2741 ntBASIC13.75□□□□□ -0.21
HLA-DOBP13765 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 VDAC1P7-201ENST00000462417 847 ntBASIC13.75□□□□□ -0.21
HLA-DOBP13765 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 SPCS2P1-201ENST00000561636 679 ntBASIC13.75□□□□□ -0.21
HLA-DOBP13765 AL049840.4-201ENST00000602422 811 ntBASIC13.75□□□□□ -0.21
HLA-DOBP13765 AL355385.1-201ENST00000606123 409 ntBASIC13.75□□□□□ -0.21
HLA-DOBP13765 AL096865.1-201ENST00000606796 927 ntBASIC13.75□□□□□ -0.21
HLA-DOBP13765 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 AC007686.3-201ENST00000619017 3487 ntBASIC13.75□□□□□ -0.21
HLA-DOBP13765 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLA-DOBP13765 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.75□□□□□ -0.21
HLA-DOBP13765 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 SLC7A15P-201ENST00000424028 1363 ntBASIC13.74□□□□□ -0.21
HLA-DOBP13765 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLA-DOBP13765 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.74□□□□□ -0.21
HLA-DOBP13765 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms