Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.32■□□□□ 0.52
CHGBP05060 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.32■□□□□ 0.52
CHGBP05060 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHGBP05060 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHGBP05060 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHGBP05060 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 ZBED1P1-201ENST00000502364 1930 ntBASIC18.31■□□□□ 0.52
CHGBP05060 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.31■□□□□ 0.52
CHGBP05060 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 INE2-201ENST00000630399 1874 ntBASIC18.31■□□□□ 0.52
CHGBP05060 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.31■□□□□ 0.52
CHGBP05060 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.31■□□□□ 0.52
CHGBP05060 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 AC099336.1-201ENST00000417053 1171 ntBASIC18.31■□□□□ 0.52
CHGBP05060 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.31■□□□□ 0.52
CHGBP05060 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.31■□□□□ 0.52
CHGBP05060 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHGBP05060 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.31■□□□□ 0.52
CHGBP05060 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.31■□□□□ 0.52
CHGBP05060 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 CROCCP1-201ENST00000426910 5675 ntBASIC18.31■□□□□ 0.52
CHGBP05060 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHGBP05060 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHGBP05060 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CHGBP05060 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHGBP05060 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.3■□□□□ 0.52
CHGBP05060 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.3■□□□□ 0.52
CHGBP05060 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.3■□□□□ 0.52
CHGBP05060 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.3■□□□□ 0.52
CHGBP05060 BNIP3P42-201ENST00000454982 569 ntBASIC18.3■□□□□ 0.52
CHGBP05060 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.3■□□□□ 0.52
CHGBP05060 KRT18P25-201ENST00000508931 1278 ntBASIC18.3■□□□□ 0.52
CHGBP05060 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.3■□□□□ 0.52
CHGBP05060 BNIP3P29-201ENST00000598302 571 ntBASIC18.3■□□□□ 0.52
CHGBP05060 AL008721.1-201ENST00000609964 604 ntBASIC18.3■□□□□ 0.52
CHGBP05060 AC011447.5-201ENST00000616168 564 ntBASIC18.3■□□□□ 0.52
CHGBP05060 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 CICP23-201ENST00000605013 2741 ntBASIC18.3■□□□□ 0.52
CHGBP05060 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHGBP05060 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.3■□□□□ 0.52
CHGBP05060 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.3■□□□□ 0.52
CHGBP05060 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHGBP05060 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 AL645937.2-201ENST00000396808 931 ntBASIC18.29■□□□□ 0.52
CHGBP05060 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.29■□□□□ 0.52
CHGBP05060 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.29■□□□□ 0.52
CHGBP05060 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms