Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 AC041040.2-201ENST00000622926 2899 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 AC067930.6-201ENST00000623257 4947 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
RFPL1O75677 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 AC027601.5-201ENST00000624065 2482 ntBASIC15.39■□□□□ 0.05
RFPL1O75677 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.39■□□□□ 0.05
RFPL1O75677 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFPL1O75677 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFPL1O75677 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RFPL1O75677 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFPL1O75677 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 OR8S1-201ENST00000310194 1080 ntBASIC15.39■□□□□ 0.05
RFPL1O75677 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.39■□□□□ 0.05
RFPL1O75677 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFPL1O75677 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 AL596325.1-201ENST00000563991 1082 ntBASIC15.39■□□□□ 0.05
RFPL1O75677 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RFPL1O75677 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.39■□□□□ 0.05
RFPL1O75677 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.39■□□□□ 0.05
RFPL1O75677 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFPL1O75677 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 Z97205.2-201ENST00000564697 1639 ntBASIC15.39■□□□□ 0.05
RFPL1O75677 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFPL1O75677 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFPL1O75677 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFPL1O75677 AC005840.4-201ENST00000541242 2494 ntBASIC15.38■□□□□ 0.05
RFPL1O75677 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.38■□□□□ 0.05
RFPL1O75677 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.38■□□□□ 0.05
RFPL1O75677 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 AL133267.1-201ENST00000398220 340 ntBASIC15.38■□□□□ 0.05
RFPL1O75677 TSSK5P-201ENST00000423978 907 ntBASIC15.38■□□□□ 0.05
RFPL1O75677 HLA-V-204ENST00000476601 1289 ntBASIC15.38■□□□□ 0.05
RFPL1O75677 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.38■□□□□ 0.05
RFPL1O75677 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.38■□□□□ 0.05
RFPL1O75677 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.38■□□□□ 0.05
RFPL1O75677 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.38■□□□□ 0.05
RFPL1O75677 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFPL1O75677 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.38■□□□□ 0.05
RFPL1O75677 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.38■□□□□ 0.05
RFPL1O75677 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.38■□□□□ 0.05
RFPL1O75677 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.38■□□□□ 0.05
RFPL1O75677 AC025181.2-201ENST00000606994 802 ntBASIC15.38■□□□□ 0.05
RFPL1O75677 AL008721.1-201ENST00000609964 604 ntBASIC15.38■□□□□ 0.05
RFPL1O75677 AL138828.2-201ENST00000615812 383 ntBASIC15.38■□□□□ 0.05
RFPL1O75677 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RFPL1O75677 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms