Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.65□□□□□ -0.22
PFDN1O60925 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PFDN1O60925 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.65□□□□□ -0.22
PFDN1O60925 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.65□□□□□ -0.22
PFDN1O60925 DGCR10-201ENST00000609839 495 ntBASIC13.65□□□□□ -0.22
PFDN1O60925 AC110285.5-201ENST00000611501 352 ntBASIC13.65□□□□□ -0.22
PFDN1O60925 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PFDN1O60925 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.65□□□□□ -0.22
PFDN1O60925 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
PFDN1O60925 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC13.65□□□□□ -0.22
PFDN1O60925 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PFDN1O60925 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PFDN1O60925 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
PFDN1O60925 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 WASH6P-202ENST00000359512 1437 ntBASIC13.64□□□□□ -0.23
PFDN1O60925 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
PFDN1O60925 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PFDN1O60925 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 AC027020.2-201ENST00000602585 2389 ntBASIC13.64□□□□□ -0.23
PFDN1O60925 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PFDN1O60925 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.64□□□□□ -0.23
PFDN1O60925 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PFDN1O60925 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 AP003041.3-201ENST00000527151 707 ntBASIC13.64□□□□□ -0.23
PFDN1O60925 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.64□□□□□ -0.23
PFDN1O60925 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.64□□□□□ -0.23
PFDN1O60925 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.64□□□□□ -0.23
PFDN1O60925 AL138781.1-201ENST00000566567 1274 ntBASIC13.64□□□□□ -0.23
PFDN1O60925 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PFDN1O60925 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PFDN1O60925 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PFDN1O60925 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.63□□□□□ -0.23
PFDN1O60925 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PFDN1O60925 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 AL031719.1-201ENST00000623365 2587 ntBASIC13.63□□□□□ -0.23
PFDN1O60925 AC090114.2-201ENST00000608477 7054 ntBASIC13.63□□□□□ -0.23
PFDN1O60925 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.63□□□□□ -0.23
PFDN1O60925 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PFDN1O60925 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.63□□□□□ -0.23
PFDN1O60925 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.63□□□□□ -0.23
PFDN1O60925 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PFDN1O60925 MESTP1-201ENST00000404287 994 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms