Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SGCEO43556 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
SGCEO43556 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.66□□□□□ -0.22
SGCEO43556 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.66□□□□□ -0.22
SGCEO43556 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SGCEO43556 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SGCEO43556 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.65□□□□□ -0.22
SGCEO43556 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SGCEO43556 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.65□□□□□ -0.22
SGCEO43556 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.65□□□□□ -0.22
SGCEO43556 TOMM22P5-201ENST00000416399 439 ntBASIC13.65□□□□□ -0.22
SGCEO43556 TSSK5P-201ENST00000423978 907 ntBASIC13.65□□□□□ -0.22
SGCEO43556 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.65□□□□□ -0.22
SGCEO43556 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.65□□□□□ -0.22
SGCEO43556 AL512638.1-201ENST00000457493 794 ntBASIC13.65□□□□□ -0.22
SGCEO43556 KRT18P43-201ENST00000469825 1281 ntBASIC13.65□□□□□ -0.22
SGCEO43556 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.65□□□□□ -0.22
SGCEO43556 BTBD7P1-201ENST00000447253 1453 ntBASIC13.65□□□□□ -0.22
SGCEO43556 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.65□□□□□ -0.22
SGCEO43556 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SGCEO43556 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SGCEO43556 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SGCEO43556 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.64□□□□□ -0.23
SGCEO43556 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 AC007191.1-201ENST00000623179 2995 ntBASIC13.64□□□□□ -0.23
SGCEO43556 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.64□□□□□ -0.23
SGCEO43556 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SGCEO43556 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SGCEO43556 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SGCEO43556 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SGCEO43556 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
SGCEO43556 PMS2P2-201ENST00000425039 1128 ntBASIC13.64□□□□□ -0.23
SGCEO43556 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.64□□□□□ -0.23
SGCEO43556 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.64□□□□□ -0.23
SGCEO43556 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.64□□□□□ -0.23
SGCEO43556 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.64□□□□□ -0.23
SGCEO43556 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms