Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNQ3O43525 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KCNQ3O43525 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNQ3O43525 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNQ3O43525 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNQ3O43525 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
KCNQ3O43525 SPTLC1P5-201ENST00000450718 252 ntBASIC19.4■□□□□ 0.7
KCNQ3O43525 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.4■□□□□ 0.7
KCNQ3O43525 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNQ3O43525 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNQ3O43525 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNQ3O43525 CHMP4BP1-201ENST00000556017 588 ntBASIC19.4■□□□□ 0.7
KCNQ3O43525 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNQ3O43525 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.4■□□□□ 0.7
KCNQ3O43525 AC009955.4-201ENST00000597192 544 ntBASIC19.4■□□□□ 0.7
KCNQ3O43525 AL136301.1-201ENST00000615830 422 ntBASIC19.4■□□□□ 0.7
KCNQ3O43525 AL162426.1-201ENST00000624141 743 ntBASIC19.4■□□□□ 0.7
KCNQ3O43525 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 AL138725.1-201ENST00000407347 1314 ntBASIC19.4■□□□□ 0.7
KCNQ3O43525 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.4■□□□□ 0.7
KCNQ3O43525 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KCNQ3O43525 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCNQ3O43525 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.39■□□□□ 0.7
KCNQ3O43525 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
KCNQ3O43525 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
KCNQ3O43525 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCNQ3O43525 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KCNQ3O43525 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNQ3O43525 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
KCNQ3O43525 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNQ3O43525 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 DPM3-202ENST00000368399 517 ntBASIC19.39■□□□□ 0.69
KCNQ3O43525 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.39■□□□□ 0.69
KCNQ3O43525 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNQ3O43525 KLF2P1-201ENST00000447438 1042 ntBASIC19.39■□□□□ 0.69
KCNQ3O43525 AC104073.2-201ENST00000453737 312 ntBASIC19.39■□□□□ 0.69
KCNQ3O43525 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNQ3O43525 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.39■□□□□ 0.69
KCNQ3O43525 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
KCNQ3O43525 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
KCNQ3O43525 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.39■□□□□ 0.69
KCNQ3O43525 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KCNQ3O43525 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNQ3O43525 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.39■□□□□ 0.69
KCNQ3O43525 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCNQ3O43525 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KCNQ3O43525 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KCNQ3O43525 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
KCNQ3O43525 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
KCNQ3O43525 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
KCNQ3O43525 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 RNA5SP423-201ENST00000517127 109 ntBASIC19.38■□□□□ 0.69
KCNQ3O43525 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
KCNQ3O43525 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 AC011270.2-201ENST00000624293 2550 ntBASIC19.38■□□□□ 0.69
KCNQ3O43525 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.38■□□□□ 0.69
KCNQ3O43525 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.38■□□□□ 0.69
KCNQ3O43525 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.38■□□□□ 0.69
KCNQ3O43525 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
KCNQ3O43525 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCNQ3O43525 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.37■□□□□ 0.69
KCNQ3O43525 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms