Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 AC018529.2-202ENST00000611482 3087 ntBASIC15.29■□□□□ 0.04
PHGDHO43175 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 AC012508.2-201ENST00000567613 1472 ntBASIC15.29■□□□□ 0.04
PHGDHO43175 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PHGDHO43175 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.29■□□□□ 0.04
PHGDHO43175 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.29■□□□□ 0.04
PHGDHO43175 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.29■□□□□ 0.04
PHGDHO43175 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 AC044860.1-202ENST00000559481 777 ntBASIC15.29■□□□□ 0.04
PHGDHO43175 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
PHGDHO43175 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.29■□□□□ 0.04
PHGDHO43175 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.29■□□□□ 0.04
PHGDHO43175 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHGDHO43175 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PHGDHO43175 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PHGDHO43175 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.28■□□□□ 0.04
PHGDHO43175 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PHGDHO43175 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.28■□□□□ 0.04
PHGDHO43175 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
PHGDHO43175 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PHGDHO43175 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PHGDHO43175 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.28■□□□□ 0.04
PHGDHO43175 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PHGDHO43175 KRT18P13-201ENST00000400056 1290 ntBASIC15.28■□□□□ 0.04
PHGDHO43175 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.28■□□□□ 0.04
PHGDHO43175 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.28■□□□□ 0.04
PHGDHO43175 KLF2P3-201ENST00000451977 1087 ntBASIC15.28■□□□□ 0.04
PHGDHO43175 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PHGDHO43175 AC069120.2-201ENST00000524091 540 ntBASIC15.28■□□□□ 0.04
PHGDHO43175 AC027369.6-201ENST00000525520 931 ntBASIC15.28■□□□□ 0.04
PHGDHO43175 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.28■□□□□ 0.04
PHGDHO43175 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PHGDHO43175 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.28■□□□□ 0.04
PHGDHO43175 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.28■□□□□ 0.04
PHGDHO43175 AC004449.1-201ENST00000564240 433 ntBASIC15.28■□□□□ 0.04
PHGDHO43175 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.28■□□□□ 0.04
PHGDHO43175 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
PHGDHO43175 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.28■□□□□ 0.04
PHGDHO43175 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PHGDHO43175 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms