Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 GHSR-202ENST00000427970 912 ntBASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 TPM4P1-201ENST00000436100 807 ntBASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 KRT18P3-201ENST00000451602 1288 ntBASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 RARRES2P9-201ENST00000565168 469 ntBASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC011467.4-201ENST00000594891 528 ntBASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC140113.2-201ENST00000604370 208 ntBASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 AC010327.5-201ENST00000586923 3061 ntBASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 HIST3H2BA-201ENST00000436555 524 ntBASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 TARDBPP1-201ENST00000442013 1203 ntBASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 KRT126P-201ENST00000549467 1181 ntBASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 KRT8P23-201ENST00000560090 1207 ntBASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRAV5A0A0B4J249 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms