Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
PCDHA5Q9Y5H7 U85056.1-201ENST00000616429 682 ntBASIC25.89■■□□□ 1.74
PCDHA5Q9Y5H7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.89■■□□□ 1.73
PCDHA5Q9Y5H7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.89■■□□□ 1.73
PCDHA5Q9Y5H7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.88■■□□□ 1.73
PCDHA5Q9Y5H7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA5Q9Y5H7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA5Q9Y5H7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA5Q9Y5H7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA5Q9Y5H7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA5Q9Y5H7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA5Q9Y5H7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA5Q9Y5H7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 AL592295.1-201ENST00000400984 884 ntBASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 NTF6A-201ENST00000591175 560 ntBASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA5Q9Y5H7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA5Q9Y5H7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHA5Q9Y5H7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA5Q9Y5H7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
PCDHA5Q9Y5H7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA5Q9Y5H7 AC129492.7-201ENST00000622992 756 ntBASIC25.83■■□□□ 1.73
PCDHA5Q9Y5H7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA5Q9Y5H7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 LONRF2P2-201ENST00000439212 571 ntBASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 AC012676.1-201ENST00000574705 1949 ntBASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA5Q9Y5H7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PCDHA5Q9Y5H7 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA5Q9Y5H7 C9orf163-202ENST00000624034 2573 ntBASIC25.79■■□□□ 1.72
PCDHA5Q9Y5H7 KRT18P60-201ENST00000312876 1297 ntBASIC25.79■■□□□ 1.72
PCDHA5Q9Y5H7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PCDHA5Q9Y5H7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA5Q9Y5H7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA5Q9Y5H7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA5Q9Y5H7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA5Q9Y5H7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA5Q9Y5H7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
PCDHA5Q9Y5H7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
PCDHA5Q9Y5H7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA5Q9Y5H7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
PCDHA5Q9Y5H7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHA5Q9Y5H7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA5Q9Y5H7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA5Q9Y5H7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA5Q9Y5H7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA5Q9Y5H7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDHA5Q9Y5H7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHA5Q9Y5H7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHA5Q9Y5H7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms