Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 DUX4L29-201ENST00000425409 679 ntBASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM5Q9Y4Y9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM5Q9Y4Y9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 HLA-L-211ENST00000482052 1765 ntBASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LSM5Q9Y4Y9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM5Q9Y4Y9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LSM5Q9Y4Y9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM5Q9Y4Y9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM5Q9Y4Y9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM5Q9Y4Y9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM5Q9Y4Y9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LSM5Q9Y4Y9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LSM5Q9Y4Y9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM5Q9Y4Y9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM5Q9Y4Y9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.92■□□□□ 0.62
LSM5Q9Y4Y9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM5Q9Y4Y9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LSM5Q9Y4Y9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LSM5Q9Y4Y9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM5Q9Y4Y9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM5Q9Y4Y9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.91■□□□□ 0.62
LSM5Q9Y4Y9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM5Q9Y4Y9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LSM5Q9Y4Y9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.89■□□□□ 0.61
LSM5Q9Y4Y9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms