Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.11■■□□□ 1.77
KDM3AQ9Y4C1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KDM3AQ9Y4C1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KDM3AQ9Y4C1 HLA-L-211ENST00000482052 1765 ntBASIC26.1■■□□□ 1.77
KDM3AQ9Y4C1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KDM3AQ9Y4C1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
KDM3AQ9Y4C1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.1■■□□□ 1.77
KDM3AQ9Y4C1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KDM3AQ9Y4C1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KDM3AQ9Y4C1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.09■■□□□ 1.77
KDM3AQ9Y4C1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
KDM3AQ9Y4C1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.09■■□□□ 1.77
KDM3AQ9Y4C1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
KDM3AQ9Y4C1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.09■■□□□ 1.77
KDM3AQ9Y4C1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
KDM3AQ9Y4C1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
KDM3AQ9Y4C1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.08■■□□□ 1.77
KDM3AQ9Y4C1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
KDM3AQ9Y4C1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
KDM3AQ9Y4C1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.08■■□□□ 1.77
KDM3AQ9Y4C1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.08■■□□□ 1.77
KDM3AQ9Y4C1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 KRT16P3-201ENST00000439127 1283 ntBASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.07■■□□□ 1.76
KDM3AQ9Y4C1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 AC092028.1-203ENST00000608262 953 ntBASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.06■■□□□ 1.76
KDM3AQ9Y4C1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
KDM3AQ9Y4C1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.05■■□□□ 1.76
KDM3AQ9Y4C1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
KDM3AQ9Y4C1 LINC01124-201ENST00000409786 2117 ntBASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 AC141586.4-201ENST00000624558 1573 ntBASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.04■■□□□ 1.76
KDM3AQ9Y4C1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.03■■□□□ 1.76
KDM3AQ9Y4C1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 LINC00543-201ENST00000567234 1845 ntBASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
KDM3AQ9Y4C1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
KDM3AQ9Y4C1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
KDM3AQ9Y4C1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
KDM3AQ9Y4C1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
KDM3AQ9Y4C1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
KDM3AQ9Y4C1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26■■□□□ 1.75
KDM3AQ9Y4C1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
KDM3AQ9Y4C1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26■■□□□ 1.75
KDM3AQ9Y4C1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
KDM3AQ9Y4C1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26■■□□□ 1.75
KDM3AQ9Y4C1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
KDM3AQ9Y4C1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
KDM3AQ9Y4C1 TSPY9P-201ENST00000440215 945 ntBASIC25.99■■□□□ 1.75
KDM3AQ9Y4C1 TSPY11P-201ENST00000442607 1045 ntBASIC25.99■■□□□ 1.75
KDM3AQ9Y4C1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
KDM3AQ9Y4C1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
KDM3AQ9Y4C1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
KDM3AQ9Y4C1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
KDM3AQ9Y4C1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.98■■□□□ 1.75
KDM3AQ9Y4C1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.98■■□□□ 1.75
KDM3AQ9Y4C1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
KDM3AQ9Y4C1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.98■■□□□ 1.75
KDM3AQ9Y4C1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
KDM3AQ9Y4C1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
KDM3AQ9Y4C1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
KDM3AQ9Y4C1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
KDM3AQ9Y4C1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.97■■□□□ 1.75
KDM3AQ9Y4C1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
KDM3AQ9Y4C1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms